The latest version of BiobaseBlast is 0.3.3.0-0.
BiobaseBlast
Version 0.2.0.0 revision 0 uploaded by ChristianHoener.
Package meta
- Synopsis
- BLAST-related tools
- Description
This library contains BLAST-related functionality:
Parser for tabular NCBI BLAST+ output
Parsers for BLOSUM and PAM matrices.
Specialized substitution functions for (in)complete amino acid / nucleotide triplet substitution.
Incomplete nucleotide patterns map one or two nucleotides to an amino acid (need for indel editing in the mitochondria of certain species like p.polycephalum).
The matrices are currently not provided but can be found here: ftp://ftp.ncbi.nih.gov/blast/matrices/
- Author
- Christian Hoener zu Siederdissen, Florian Eggenhofer
- Bug reports
- https://github.com/choener/BiobaseBlast/issues
- Category
- Bioinformatics
- Copyright
- Christian Hoener zu Siederdissen, 2013 - 2017
- Homepage
- https://github.com/choener/BiobaseBlast
- Maintainer
- choener@bioinf.uni-leipzig.de
- Package URL
- n/a
- Stability
- experimental