The latest version of BiobaseFasta is 0.4.0.1-0.
BiobaseFasta
Version 0.0.1.0 revision 0 uploaded by ChristianHoener.
Package meta
- Synopsis
- conduit-based FASTA parser
- Description
Conduit-based handling of FASTA files. This library provides a streaming interface. The user selects a window size, then handles the window. For each window, the previous (past) window is available, in case some data sits on the boundary between windows.
FastaTool is a simple tool providing information on FASTA files, and allowing to extract sequences and subsequences.
The library is, in general, in a "preview" state. In cases where you need to scan large FASTA files fast and with low memory overhead, the streamFasta function, however, should already be useable enough.
- Author
- Christian Hoener zu Siederdissen
- Bug reports
- n/a
- Category
- Bioinformatics
- Copyright
- Christian Hoener zu Siederdissen, 2011-2013
- Homepage
- http://www.tbi.univie.ac.at/~choener/
- Maintainer
- choener@tbi.univie.ac.at
- Package URL
- n/a
- Stability
- experimental