The latest version of RNAFold is 1.99.3.4-0.
RNAFold
Version 1.99.1.3 revision 0 uploaded by ChristianHoener.
Package meta
- Synopsis
- RNA secondary structure prediction
- Description
RNAfold v2 using the ADPfusion library. The RNAfold algorithm is used to determine how fast we can be compared to a highly optimized C program.
If possible, build using the GHC llvm backend, and GHC-7.2.2. GHC-7.4.x produces very bad code on my system, please benchmark using 7.2.2.
NOTE I'd like to rename this package to RNAfold, like the C implementation. Do not install "globally", especially if you normally use RNAfold from the ViennaRNA package, for obvious reasons.
NOTE I am reluctant to call this v2 for now.
- Author
- Christian Hoener zu Siederdissen (Haskell), Ivo L. Hofacker et al (ViennaRNA), 2010-2012
- Bug reports
- n/a
- Category
- Bioinformatics
- Copyright
- Christian Hoener zu Siederdissen, 2010-2012
- Homepage
- http://www.tbi.univie.ac.at/~choener/adpfusion
- Maintainer
- choener@tbi.univie.ac.at
- Package URL
- n/a
- Stability
- experimental