The latest version of bioinformatics-toolkit is 0.10.0-0.
lib:bioinformatics-toolkit
Modules
- Bio.ChIPSeq
- Bio.ChIPSeq.FragLen
- Bio.Data.Bed
- Bio.Data.Fasta
- Bio.GO
- Bio.GO.GREAT
- Bio.GO.Parser
- Bio.Motif
- Bio.Motif.Alignment
- Bio.Motif.Merge
- Bio.Motif.Search
- Bio.RealWorld.BioGRID
- Bio.RealWorld.ENCODE
- Bio.RealWorld.Ensembl
- Bio.RealWorld.GENCODE
- Bio.RealWorld.ID
- Bio.RealWorld.UCSC
- Bio.Seq
- Bio.Seq.IO
- Bio.Utils.Functions
- Bio.Utils.Misc
- Bio.Utils.Overlap
- Bio.Utils.Types
Dependencies
- IntervalMap lib:IntervalMap >=0.5.0.0
- aeson lib:aeson >=0
- aeson-pretty lib:aeson-pretty >=0
- base lib:base >=4.8 && <5.0
- binary lib:binary >=0
- bytestring lib:bytestring >=0.10
- bytestring-lexing lib:bytestring-lexing >=0.5
- case-insensitive lib:case-insensitive >=0
- clustering lib:clustering >=0
- colour lib:colour >=0
- conduit-combinators lib:conduit-combinators >=0
- containers lib:containers >=0.5
- data-default-class lib:data-default-class >=0
- double-conversion lib:double-conversion >=0
- hexpat lib:hexpat >=0
- http-conduit lib:http-conduit >=2.1.8
- math-functions lib:math-functions >=0
- matrices lib:matrices >=0.4.3
- mtl lib:mtl >=2.1.3.1
- palette lib:palette >=0
- parallel lib:parallel >=3.2
- primitive lib:primitive >=0
- split lib:split >=0
- statistics lib:statistics >=0.13.2.1
- text lib:text >=0.11
- transformers lib:transformers >=0.3.0.0
- unordered-containers lib:unordered-containers >=0.2
- vector lib:vector >=0
- vector-algorithms lib:vector-algorithms >=0
- word8 lib:word8 >=0
Reverse dependencies
Direct only. Not exhaustive.
- acme-everything lib:acme-everything
- bbi test:tests
- bioinformatics-toolkit bench:bench
- bioinformatics-toolkit exe:mergeMotifs
- bioinformatics-toolkit exe:mkindex
- bioinformatics-toolkit exe:viewSeq
- bioinformatics-toolkit test:tests