The latest version of phybin is 0.3-0.
phybin
Version 0.2.11 revision 0 uploaded by RyanNewton.
Package meta
- Synopsis
- Utility for clustering phylogenetic trees in Newick format based on Robinson-Foulds distance.
- Description
This package provides a libary and executable for dealing with Newick tree files.
It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.
phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).
- Author
- Ryan Newton <rrnewton@gmail.com>
- Bug reports
- n/a
- Category
- Bioinformatics
- Copyright
- Copyright (c) 2010 Ryan Newton
- Homepage
- http://www.cs.indiana.edu/~rrnewton/projects/phybin/
- Maintainer
- Ryan Newton <rrnewton@gmail.com>
- Package URL
- n/a
- Stability
- Beta